Before you go cutting up your hulls to take a look at the core I would suggest treating the repair as delam only first. If that does not seen to fix the problem, then your freind may be right.
One upgrade to consider adding at this point in time are inspection ports for your hulls. I would put them about 12" in front of your forward pylons. This will do a few things for you:
1) Allow you to look at the core material in your decks without completely separating them. This will not show you the entire body of the core material, but enough to tell what is going on.
2) Provide an easier way to inject the epoxy between glass layers for the delam repair for the area around the port.
3) Allow your hulls to dry out better once you start sailing.
4) Provide storage by using port bags (
http://www.hobiecat.com/support/pdfs/12_13.pdf look on the second page).
5) And if you ever (or should I say when as we all do it once) forget to put in your drain plugs the ports will allow for you to use bilge pump to speed up the draining process.
I would suggest the 5" ports as they allow better access than the 4".